SubtiBank SubtiBank
Version comparison:

2017-8-11 16:0:3Tue Dec 13 2016 11:16:30 GMT+0100 (CET)

proteinLength

312

geneLength

936

Gene

Coordinates

277,342 → 278,280

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-C033 (ycbK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2031 NBRP B. subtilis, Japan]

aminos

MRAEEQSKIREAAAGTIFLLIGTVCFASKSIWIKWAYQMGAEPDAVLLYRQLLAVPLFWLIFLIYRPPMPDGKKKGDLWKACGAGVFCFFLSPLLDFIGLNHVSAMVERILLMSYPLFVFGFTACRDRKMSSIQDLFAVLAVMFGLFLALGGWNAELFQANMIGAVFILLSSAVYAGYLVLSGHLVHQIGGIRLNAYGMTAAGAAMMLYTGIKSAAGMNTPMAAYPLSMYGLFAVIAVVTTVIPFVLMLEGIKRIGAQRAAAISMAGPILTIFYGALFLGERLGLIQVIGCGGVFFVITGMEYRKLKTGKKE

[SW|Categories] containing this gene/protein

[SW|transporters/ other], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

277,342 -> 278,280

Expression and Regulation

Operon

''[[protein|rtpA]]-[[protein|ycbK]]'' [Pubmed|10706627]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigA]] [Pubmed|10706627]

Expression and Regulation

Regulation

''[[protein|rtpA]]'': induced by tryptophan limitation ([[protein|T-box]] in the mRNA leader) [Pubmed|10706627]

''[[protein|ycbK]]'': induced by tryptophan limitation ([[protein|MtrB]] in the mRNA leader) [Pubmed|16879415]

Expression and Regulation

Regulatory mechanism

[[protein|T-box]]: transcription termination/ antitermination [Pubmed|10706627]

[[protein|MtrB]]: control of translation initiation (access of the ribosome to the Shine-Dalgarno sequence) [Pubmed|16879415]